Faculty Database - Murakami shuichirou

Books and Papers

Major Subjects

Research Topics, Consignment Studies & KAKENHI Researches

Email Addresses

Current Specialized Field

（Last updated : 2018-11-17 23:59:57）

Murakami shuichirou
Department Undergraduate School , School of Agriculture

Position Professor

■ Books and Papers

1.	1990	Article	Microbial metabolism of aniline through a meta-cleavage pathway : isolation of strains and production of cateohol 2, 3-dioxygenase. Agricultural Biological Chemistry 54(1),pp.205-206 (Collaboration)
2.	1991	Article	Induction, purification, and characterization of catechol 2, 3-dioxygenase from aniline-assimilating Pseudomonas sp. FK-8-2 Agricultural Biological Chemistry 55(5),pp.1281-1289 (Collaboration)
3.	1991	Article	Catechol 1,2-dioxygenase isozymes in soil bacteria metabolizing aromatic compounds. Soil Biology and Biochemistry 23(9),pp.815-819 (Collaboration)
4.	1993	Article	Nitrate reduction in Bacillus licheniformis in the presence of ammonium salt by shaking culture Bioscience, Biotechnology, and Biochemistry 57(7),pp.1082-1086 (Collaboration)
5.	1993	Article	Increase in nitrate reductase activity with ammonium chloride in Bacillus licheniformis by shaking culture Bioscience, Biotechnology, and Biochemistry, 57(12),pp.2170-2171 (Collaboration)
6.	1995	Article	Anaerobic synthesis of extracellular proteases by the soil bacterium Bacillus sp. AM-23 : purification and characterization of the enzymes Soil Biology and Biochemistry 27(11),pp.1377-1382 (Collaboration)
7.	1996	Article	Production of catechol by transpositional mutants of aniline-assimilating Pseudomonas species AW-2 Journal of Fermentation and Bioengineering 82(5),pp.480-483 (Collaboration)
8.	1997	Article	Classification of catechol 1,2-dioxygenase family : sequence analysis of a gene for the catechol1,2-dioxygenase showing high specificity for methylcatechols from Gram positive aniline-assimilating Rhodococcus erythropolis AN-13. Gene 185(1),pp.49-54 (Collaboration)
9.	1997	Article	Partial punification and characterization of a bacterial dioxygenase that catalyzes the ring fission of 2-aminophenol. Microbiological Research 152(1),pp.33-38 (Collaboration)
10.	1997	Article	Novel genes encoding 2-aminophenol 1,6-dioxygenase from Pseudomonas species AP-3 growing on 2-aminophenol and catalytic properties of the purified enzyme. Journal of Biological Chemistry 272(23),pp.147271-14732
11.	1997	Article	A high level of accumulation of 2-hydroxymuconic 6-semialdehyde from aniline by the transpositional mutant Y-2 of Pseudomonas species AW-2. Microbiological Research 152(2),pp.129-135 (Collaboration)
12.	1997	Article	Production of methy-, dimethyl, ethyl, chloro-, fluoro-and hydroxyl derivatives of catechol from thirteen aromatic amines by the transcriptional mutant B-9 of the aniline-assimilating Pseudomonas species AW-2 Journal of Fermentation and Bioengineering 84(3),pp.232-235 (Collaboration)
13.	1998	Article	Purification, characterization, and gene analysis of catechol 2,3-dioxygenase from the aniline-assimilating bacterium Pseudomonas species AW-2. Bioscience, Biotechnology, and Biochemistry 62(4),pp.747-752 (Collaboration)
14.	1998	Article	Purification and characterization of muconate cycloisomerase from aniline-assimilating Rhodococcus erythropolis AN-13. Journal of Fermentation and Bioengineering 85(5),pp.521-524 (Collaboration)
15.	1998	Article	Purification and characterization of two muconate cycloisomerase isozymes from aniline-assimilating Frateuria species ANA-18. Bioscience, Biotechnology, and Biochemistry 62(6),pp.1129-1133 (Collaboration)
16.	1998	Article	Purification and characterization of four catechol 1,2-dioxygenase isozymes from the benzamide-assimilating bacterium Arthrobacter species BA-5-17 Microbiological Research 153(2),pp.163-171 (Collaboration)
17.	1998	Article	Metabolism of 2-aminophenol by Pseudomonas sp. AP-3 : modified meta-cleavage pathway. Archives of Microbiology 170(2),pp.132-137 (Collaboration)
18.	1999	Article	Cloning and sequence analysis of two catechol-degrading gene clusters from the aniline-assimilating bacterium Frateuria species ANA-18. Gene 226(2),pp.189-198 (Collaboration)
19.	1999	Article	Cloning of a gene hydroxyquinol 1,2-dioxygenase that catalyzes both intradiol and extradiol ring cleavage of catechol. Bioscience, Biotechnology, and Biochem.istry 63(5),pp.859-865 (Collaboration)
20.	1999	Article	Reclassification of the strains with low G+C contents of DNA belonging to the genus Gluconobacter ASAI 1935 (Acetobacteraceae). Bioscience, Biotechnology, and Biochemistry 63(6),pp.989-992 (Collaboration)
21.	2000	Article	Genetic characteristics of cellulose-forming acetic acid bacteria identified phenotypically as Gluconacetobacter xylinus Bioscience, Biotechnology, and Biochemistry 64(4),pp.757-760 (Collaboration)
22.	2000	Article	Complete nucleotide sequence and functional analysis of the genes for 2-aminophenol metabolism from Pseudomonas sp. AP-3. Archives of Microbiology 174(4),pp.265-272 (Collaboration)
23.	2001	Article	Isolation of a benzoate-utilizing Pseudomonas strain from soil and production of catechol from benzoate by transpositional mutants. Microbiological Research 156(2),pp.151-158 (Collaboration)
24.	2001	Article	Production of catechol from benzoate by the wild strain Ralstonia species Ba-0323 and characterization of its catechol 1,2-dioxygenase. Bioscience, Biotechnology, and Biochemistry 65(9),pp.1957-1964 (Collaboration)
25.	2001	Article	Regulation by two CatR proteins that differ in binding affinity to catB promoters expressing two cat gene clusters. Bioscience, Biotechnology, and Biochemistry 65(10),pp.2146-2153 (Collaboration)
26.	2002	Article	Isolation and culture conditions of a Klebsiella pneumoniae strain that can utilize ammonium and nitrate ions simultaneously with controlled iron and molybdate ion concentrations. Bioscience, Biotechnology, and Biochemistry 66(5),pp.996-1001 (Collaboration)
27.	2002	Article	Ammonia assimilation in Klebsiella pneumoniae F-5-2 that can utilize ammonium and nitrate ions simultaneously: purification and characterization of glutamate dehydrogenase and glutamine synthetase. Journal of Bioscience and Bioengineering 93(6),pp.584-588 (Collaboration)
28.	2002	Article	A novel meta-cleavage dioxygenase that cleaves a carboxyl-group-substituted 2-amino- phenol: purification and characterization of 4- amino-3-hydroxy-benzoate 2,3-dioxygenase from Bordetella sp. strain 10d. European Fournal of Biochemistry 269(23),pp.5871-5877 (Collaboration)
29.	2003	Article	The metabolic pathway of 4- aminophenol in Burkholderia sp. strain AK-5 differs from that of aniline and aniline with C-4 substituents. Applied and environmental microbiology 69(9),pp.5410-5413
30.	2003	Article	Cloning and functional analysis of aniline dioxygenase gene cluster, from Frateuria species ANA-18, that metabolizes aniline via an ortho-cleavage pathway of catechol. Bioscience Biotechnology Biochemistry 67(11),pp.2351-2358 (Collaboration)
31.	2004	Article	Purification, characterization, and gene cloning of cis,cis-muconate cycloisomerase from benzamide-assimilating Arthrobacter sp. BA-5-17 FEMS Microbiology Letters 231(1),pp.119-124 (Collaboration)
32.	2004	Article	Cloning of a gene encoding 4-amino-3-hydroxybenzoate 2,3-dioxygenase from Bordetella sp. 10d Biochemical and Biophysical Research Communications 314(2),pp.489-494 (Collaboration)
33.	2004	Article	A novel coupled enzyme assay reveals an enzyme responsible for the deamination of a chemically unstable intermediate in the metabolic pathway of 4-amino-3-hydroxybenzoic acid in Bordetella sp. strain 10d European Journal of Biochemistry 271(15),pp.3248-3254 (Collaboration)
34.	2004	Article	Constitutive synthesis, purification, and characterization of catechol 1,2-dioxygenase from the aniline-assimilating bacterium Rhodococcus sp. AN-22 Journal of. Bioscience and Bioengineering 98(2),pp.71-76 (Collaboration)
35.	2005	Article	Constitutive synthesis of enzymes involved in 2-aminophenol metabolism and inducible synthesis of enzymes involved in benzoate, p-hydroxybenzoate, and protocatechuate metabolism in Pseudomonas sp. strain AP-3 Bioscience, Biotechnology, and Biochemistry 69(5),pp.1033-1035 (Collaboration)
36.	2005	Article	Constitutive expression of catABC genes in the aniline-assimilating bacterium Rhodococcus sp. AN-22: production, purification, characterization and gene analysis of CatA, CatB and CatC Biochemical Journal 393(1),pp.219-226 (Collaboration)
37.	2006	Article	Purification and characterization of two novel halotolerant extracellular proteases from Bacillus subtilis strain FP-133 Bioscience, Biotechnology, and Biochemistry 70(2),pp.433-440 (Collaboration)
38.	2006	Article	Purification and characterization of a halotolerant intracellular protease from Bacillus subtilis strain FP-133 Journal of Basic Microbiology 46(4),pp.294-304 (Collaboration)
39.	2006	Article	Microbial transformation of aniline derivatives: regioselective biotransformation and detoxification of 2-phenylenediamine by Bacillus cereus strain PDa-1 Journal of. Bioscience and Bioengineering 102(1),pp.21-27
40.	2006	Article	Metabolism of 4-amino-3-hydroxybenzoic acid by Bordetella sp. strain 10d: a different modified meta-cleavage pathway for 2-aminophenols Bioscience, Biotechnology, and Biochemistry 70(11),pp.2653-2661 (Collaboration)
41.	2007	Article	Bacillus cereus strain 10-L-2 produces two arylamine N-acetyltransferases that transform 4-phenylenediamine into 4-aminoacetanilide Journal of. Bioscience and Bioengineering 103(2),pp.147-154 (Collaboration)
42.	2007	Article	Screening and characterization of bacteria that can utilize ammonium and nitrate ions simultaneously under controlled cultural conditions Journal of. Bioscience and Bioengineering 103(2),pp.185-191 (Collaboration)
43.	2007	Article	Isolation and characterization of thermotolerant bacterium utilizing ammonium and nitrate ions under aerobic conditions Biotechnology Letters 29(3),pp.385-390 (Collaboration)
44.	2007	Article	Cloning and expression of cyclodextrin glycosyltransferase gene from Paenibacillus sp. T16 isolated from hot spring soil in northern Thailand Journal of Biochemistry and Molecular Biology 40(3),pp.333-340 (Collaboration)
45.	2007	Article	Metabolism of azo dyes by Lactobacillus casei TISTR 1500 and effects of various factors on decolorization Water Research 41(5),pp.985-992 (Collaboration)
46.	2007	Article	Adaptation of Pseudomonas sp. strain 7-6 to quaternary ammonium compounds and their degradation via dual pathways Applied and Environmental Microbiology 73(6),pp.1797-1802 (Collaboration)
47.	2007	Article	Purification and characterization of two alkaline, thermotolerant α-amylases from Bacillus halodurans 38C-2-1 and expression of the cloned gene in Escherichia coli Bioscience, Biotechnology, and Biochemistry 71(10),pp.2393-2401 (Collaboration)
48.	2008	Article	Purification and characterization of five alkaline, thermotolerant, and maltotetraose-producing α-amylases from Bacillus halodurans MS-2-5, and production of recombinant enzymes in Escherichia coli Enzyme and Microbial Technology 43(4-5),pp.321-328 (Collaboration)
49.	2008	Article	Purification, characterization, and gene cloning of Ceriporiopsis sp. strain MD-1 peroxidases that decolorize human hair melanin Applied and Environmental Microbiology 74(16),pp.5106-5112 (Collaboration)
50.	2009	Article	Gene cloning and characterization of arylamine N-acetyltransferase from Bacillus cereus strain 10-L-2 Journal of. Bioscience and Bioengineering 107(1),pp.27-32 (Collaboration)
51.	2009	Article	Purification and characterization of an eggshell membrane decomposing protease from Pseudomonas aeruginosa strain ME-4 Journal of. Bioscience and Bioengineering 107(4),pp.373-378 (Collaboration)
52.	2009	Article	Purification and characterization of an extracellular laccase from Phlebia radiata strain BP-11-2 that decolorizes fungal melanin Bioscience, Biotechnology, and Biochemistry 73(4),pp.939-942 (Collaboration)
53.	2009	Article	Gene cloning and characterization of a deaminase from the 4-amino-3-hydroxybenzoate-assimilating Bordetella sp. strain 10d, FEMS Microbiology Letters 298(1),pp.93-98 (Collaboration)
54.	2010	Article	Expression and characterization of a fusion protein-containing cyclodextrin glycosyltransferase from Paenibacillus sp. A11 Journal of Basic Microbiology 50,pp.1-9 (Collaboration)
55.	2011	Article	Fe-superoxide dismutase and 2-hydroxy-1,4-benzoquinone reductase preclude the auto-oxidation step in 4-aminophenol metabolism by Burkholderia sp. strain AK-5, Biodegradation Biodegradation accepted (Collaboration)
56.	2011	Article	Molecular cloning and sequence analysis of two distinct halotolerant extracellular proteases from Bacillus subtilis FP-133 Bioscience Biotechnology Biochemistry 75(1),pp.148-151 (Collaboration)
57.	2013	Article	Analysis of functional xylanases in xylan degradation by Aspergillus niger E-1 and characterization of the GH family 10 xylanase XynVII SpringerPlus 2,pp.447 (Collaboration)
58.	2013	Article	Crystallization and Preliminary X-Ray Crystallographic Analysis of the Amylomaltase from Corynebacterium glutamicum Acta Crystallographica Section F 69,pp.1004-1006 (Collaboration)
59.	2015	Article	Characterization of amylomaltase from Thermus filiformis and the increase in alkaline and thermo-stability by E27R substitution 50,pp.1814-1824 (Collaboration)
60.	2017/04	Article	Synthesis, structural characterization, and biological properties of pentyl- and isopentyl-alpha-D-glucosides Applied Biochemistry and Microbiology 53(4),pp.410-420 (Collaboration)
61.	2017/03	Article	Localization of functional beta-xylosidases, encoded by the same single gene, xlsIV (xlnD), from Aspergillus niger E-1 Bioscience, Biotechnology, and Biochemistry 81(3),pp.621-624 (Collaboration)
Display 5 items
Display all(61)

■ Major Subjects

Microbial Chemmistry

■ Research Topics, Consignment Studies & KAKENHI Researches

1.	2008	Study on metabolisms of aromatic compounds by microorganisms (Key Word : aromatic compounds)
2.	2008	Development of cultivation methods for viable but unculturable microorganisms (Key Word : "viable but unculturable microorganisms,,")
3.	2008	Isolation of novel glycosyltransferase-producing microorganisms (Key Word : glycosyltransferase)
4.	2008	Repression of the emission of greenhouse gases from rice and vegetable fields (Key Word : "repression of methane, repression of nitrous oxide")

■ Email Addresses

■ Current Specialized Field

Applied microbiology